Driving green innovation to promote high-quality economic development is the focus of the theoretical and practical circles. The primary party organization of enterprises is an important factor. Exploreing the impact of party organization embedding on enterprise green innovation requires manual collection and sorting of party organization data in A-share listed private enterprises. The embeddedness of party organization is divided into two dimensions: structural embeddedness and relational embeddedness. The results found that the embedded party organization structure promotes the green innovation of enterprises. The party organization is at the center of the enterprise''s internal network, which is conducive to the green innovation practice of enterprises. The embedding of the relationship between party organizations can promote the green innovation of enterprises. The increase in the number of party organization activities can enhance the company’s trust in the party organization, which can promote the company’s green innovation. Studying the relationship between party organization embeddedness and green innovation can deepen enterprises'' understanding of the role of party organization construction on green innovation. At the same time, it can provide suggestions for promoting the green innovation of enterprises from the perspective of party organization embeddedness.